Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DEPDC4Q8N2C3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 AC093827.2-201ENST00000512654 315 ntBASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 AC120498.8-201ENST00000614275 531 ntBASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DEPDC4Q8N2C3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 AC098590.1-201ENST00000468126 897 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 RPS2P52-201ENST00000469610 820 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 PRKY-204ENST00000533551 1019 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 RN7SL471P-201ENST00000580476 299 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 AC069544.1-201ENST00000609399 999 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 AL162741.1-201ENST00000565563 1558 ntBASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
DEPDC4Q8N2C3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
DEPDC4Q8N2C3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 RPPH1-201ENST00000516869 333 ntBASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.39■□□□□ 0.37
DEPDC4Q8N2C3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms