Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AP000525.1-201ENST00000608286 694 ntBASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC116Q8IYX3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC116Q8IYX3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC116Q8IYX3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC116Q8IYX3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 MIR1238-201ENST00000408483 83 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AL390955.1-201ENST00000428694 934 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 TSPY15P-201ENST00000457163 923 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC093827.2-201ENST00000512654 315 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AP005242.2-201ENST00000580065 1175 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC066615.1-201ENST00000640911 628 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AL357033.4-201ENST00000617703 1807 ntBASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC116Q8IYX3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 CA15P1-201ENST00000481698 905 ntBASIC17.62■□□□□ 0.41
CCDC116Q8IYX3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms