Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 AL137013.1-201ENST00000432946 1228 ntBASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 KRT18P21-201ENST00000515767 1272 ntBASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC146Q8IYE0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 MIR564-202ENST00000385049 94 ntBASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 RN7SL850P-201ENST00000579959 291 ntBASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CCDC146Q8IYE0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
CCDC146Q8IYE0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 WWOX-216ENST00000569818 525 ntBASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 AC141257.4-201ENST00000634557 245 ntBASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 AC136944.6-201ENST00000634818 245 ntBASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC24.74■■□□□ 1.55
CCDC146Q8IYE0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AC104581.1-202ENST00000635932 2618 ntBASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 LIN28AP1-201ENST00000429574 405 ntBASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AL023973.1-201ENST00000624619 620 ntBASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CCDC146Q8IYE0 AC126763.1-201ENST00000552015 2118 ntBASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms