Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT39Q6A163 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT39Q6A163 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.19■□□□□ 0.82
KRT39Q6A163 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 MYC-208ENST00000641036 567 ntBASIC20.19■□□□□ 0.82
KRT39Q6A163 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT39Q6A163 AL499627.1-201ENST00000569373 2188 ntBASIC20.19■□□□□ 0.82
KRT39Q6A163 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT39Q6A163 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT39Q6A163 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
KRT39Q6A163 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT39Q6A163 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT39Q6A163 KRT8P45-201ENST00000414328 1447 ntBASIC20.19■□□□□ 0.82
KRT39Q6A163 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT39Q6A163 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT39Q6A163 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT39Q6A163 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KRT39Q6A163 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
KRT39Q6A163 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT39Q6A163 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT39Q6A163 AC112777.1-201ENST00000540175 1423 ntBASIC20.18■□□□□ 0.82
KRT39Q6A163 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT39Q6A163 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT39Q6A163 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT39Q6A163 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 AC087499.1-201ENST00000418141 1075 ntBASIC20.17■□□□□ 0.82
KRT39Q6A163 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT39Q6A163 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT39Q6A163 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
KRT39Q6A163 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT39Q6A163 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT39Q6A163 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT39Q6A163 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT39Q6A163 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT39Q6A163 AC036111.1-201ENST00000533973 1582 ntBASIC20.17■□□□□ 0.82
KRT39Q6A163 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT39Q6A163 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 KRT18P41-201ENST00000518924 1277 ntBASIC20.16■□□□□ 0.82
KRT39Q6A163 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT39Q6A163 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT39Q6A163 WWOX-216ENST00000569818 525 ntBASIC20.16■□□□□ 0.82
KRT39Q6A163 CR769767.2-201ENST00000622735 460 ntBASIC20.16■□□□□ 0.82
KRT39Q6A163 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
KRT39Q6A163 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT39Q6A163 AC034236.2-201ENST00000606662 1610 ntBASIC20.16■□□□□ 0.82
KRT39Q6A163 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT39Q6A163 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT39Q6A163 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT39Q6A163 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT39Q6A163 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT39Q6A163 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT39Q6A163 AC005082.1-201ENST00000413042 2259 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms