Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 STARP1-201ENST00000397973 869 ntBASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 AC083849.1-201ENST00000615227 514 ntBASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 AL121956.5-201ENST00000625261 221 ntBASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF17Q5VTA0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 AC005332.1-201ENST00000577698 1310 ntBASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 AC092597.1-201ENST00000487352 616 ntBASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF17Q5VTA0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 LINC01311-201ENST00000565162 1445 ntBASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 AP000550.4-202ENST00000639755 178 ntBASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF17Q5VTA0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 IER3-202ENST00000376377 1350 ntBASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF17Q5VTA0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms