Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 AP002383.4-201ENST00000442518 975 ntBASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 RNF126P1-202ENST00000569893 925 ntBASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNFT1Q5M7Z0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 BX276092.5-203ENST00000456199 560 ntBASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 AL121672.3-201ENST00000608644 468 ntBASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNFT1Q5M7Z0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNFT1Q5M7Z0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNFT1Q5M7Z0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 AC092329.2-201ENST00000598402 547 ntBASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 AC093525.10-201ENST00000625130 1569 ntBASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.83■□□□□ 0.28
RNFT1Q5M7Z0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 AC034236.2-201ENST00000606662 1610 ntBASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.82■□□□□ 0.28
RNFT1Q5M7Z0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms