Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.23■□□□□ 0.83
CBWD3Q5JTY5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBWD3Q5JTY5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
CBWD3Q5JTY5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBWD3Q5JTY5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 AC010947.1-201ENST00000623454 693 ntBASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CBWD3Q5JTY5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 AC073592.3-201ENST00000625118 1834 ntBASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 KRT8P45-201ENST00000414328 1447 ntBASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 MIR564-202ENST00000385049 94 ntBASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 AC007663.1-201ENST00000438948 1240 ntBASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.2■□□□□ 0.82
CBWD3Q5JTY5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 TSPY14P-201ENST00000303979 915 ntBASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 TSPY17P-201ENST00000450329 467 ntBASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 AC036111.1-201ENST00000533973 1582 ntBASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms