Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 CES3-203ENST00000543856 3178 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 FP700111.2-201ENST00000619190 1892 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 PCDHB17P-201ENST00000539533 2393 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 PWWP2AP1-201ENST00000429776 2273 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC121338.2-201ENST00000622535 1744 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AC099063.4-201ENST00000641099 1602 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01554Q52M75 AP006587.3-201ENST00000525742 1516 ntBASIC9.41□□□□□ -0.9
LINC01554Q52M75 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
LINC01554Q52M75 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 AL035685.1-201ENST00000636663 812 ntBASIC9.4□□□□□ -0.9
LINC01554Q52M75 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC9.4□□□□□ -0.9
LINC01554Q52M75 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01554Q52M75 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms