Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO4Q2I0M5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AC004832.2-201ENST00000426397 482 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 MTDHP3-201ENST00000594186 672 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AC010240.3-201ENST00000607688 395 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 Z83851.2-201ENST00000609564 659 ntBASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RSPO4Q2I0M5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 AP006288.1-201ENST00000446065 395 ntBASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 AC092910.1-201ENST00000482027 1129 ntBASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 AC011467.4-201ENST00000594891 528 ntBASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 AC114341.1-201ENST00000618070 349 ntBASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RSPO4Q2I0M5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RSPO4Q2I0M5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RSPO4Q2I0M5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RSPO4Q2I0M5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RSPO4Q2I0M5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RSPO4Q2I0M5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 RNA5SP416-201ENST00000516838 111 ntBASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 AC002347.1-201ENST00000569543 541 ntBASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.08■□□□□ 0.48
RSPO4Q2I0M5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms