Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HSPG2P98160 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.57□□□□□ -0.56
HSPG2P98160 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.57□□□□□ -0.56
HSPG2P98160 AC027612.4-201ENST00000605371 583 ntBASIC11.57□□□□□ -0.56
HSPG2P98160 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.57□□□□□ -0.56
HSPG2P98160 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 AL353692.3-201ENST00000407031 1396 ntBASIC11.57□□□□□ -0.56
HSPG2P98160 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.57□□□□□ -0.56
HSPG2P98160 GUSBP12-201ENST00000513727 720 ntBASIC11.57□□□□□ -0.56
HSPG2P98160 MIR3180-4-201ENST00000582223 153 ntBASIC11.57□□□□□ -0.56
HSPG2P98160 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.57□□□□□ -0.56
HSPG2P98160 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HSPG2P98160 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC11.56□□□□□ -0.56
HSPG2P98160 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.56□□□□□ -0.56
HSPG2P98160 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 AC190387.1-201ENST00000551683 408 ntBASIC11.56□□□□□ -0.56
HSPG2P98160 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.56□□□□□ -0.56
HSPG2P98160 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC11.56□□□□□ -0.56
HSPG2P98160 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 RCN1P2-201ENST00000398357 915 ntBASIC11.56□□□□□ -0.56
HSPG2P98160 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.56□□□□□ -0.56
HSPG2P98160 KRT18P2-201ENST00000447938 1258 ntBASIC11.56□□□□□ -0.56
HSPG2P98160 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
HSPG2P98160 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HSPG2P98160 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.56□□□□□ -0.56
HSPG2P98160 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.56□□□□□ -0.56
HSPG2P98160 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.56□□□□□ -0.56
HSPG2P98160 AC092865.6-201ENST00000642101 219 ntBASIC11.56□□□□□ -0.56
HSPG2P98160 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC11.55□□□□□ -0.56
HSPG2P98160 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.55□□□□□ -0.56
HSPG2P98160 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
HSPG2P98160 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.55□□□□□ -0.56
HSPG2P98160 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 AL512353.2-201ENST00000448759 1962 ntBASIC11.55□□□□□ -0.56
HSPG2P98160 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC11.55□□□□□ -0.56
HSPG2P98160 PAWRP1-201ENST00000451083 565 ntBASIC11.55□□□□□ -0.56
HSPG2P98160 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.55□□□□□ -0.56
HSPG2P98160 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.55□□□□□ -0.56
HSPG2P98160 AL078644.1-201ENST00000609881 752 ntBASIC11.55□□□□□ -0.56
HSPG2P98160 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.55□□□□□ -0.56
HSPG2P98160 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HSPG2P98160 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
HSPG2P98160 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.55□□□□□ -0.56
HSPG2P98160 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
HSPG2P98160 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.55□□□□□ -0.56
HSPG2P98160 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms