Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.49■□□□□ 0.23
NKX6-1P78426 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.49■□□□□ 0.23
NKX6-1P78426 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NKX6-1P78426 CKBP1-201ENST00000565489 1086 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
NKX6-1P78426 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.49■□□□□ 0.23
NKX6-1P78426 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.49■□□□□ 0.23
NKX6-1P78426 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NKX6-1P78426 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NKX6-1P78426 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX6-1P78426 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NKX6-1P78426 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 AC120498.9-201ENST00000339021 3867 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NKX6-1P78426 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX6-1P78426 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NKX6-1P78426 AC007663.1-201ENST00000438948 1240 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 HOMER2P1-201ENST00000455653 964 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.48■□□□□ 0.23
NKX6-1P78426 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.48■□□□□ 0.23
NKX6-1P78426 AL512604.3-201ENST00000569583 964 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.48■□□□□ 0.23
NKX6-1P78426 AC011558.1-201ENST00000623459 338 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX6-1P78426 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.48■□□□□ 0.23
NKX6-1P78426 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 AL158211.5-201ENST00000623583 2518 ntBASIC16.48■□□□□ 0.23
NKX6-1P78426 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NKX6-1P78426 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.47■□□□□ 0.23
NKX6-1P78426 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.47■□□□□ 0.23
NKX6-1P78426 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
NKX6-1P78426 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.47■□□□□ 0.23
NKX6-1P78426 AC140113.3-201ENST00000605663 199 ntBASIC16.47■□□□□ 0.23
NKX6-1P78426 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
NKX6-1P78426 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NKX6-1P78426 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX6-1P78426 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 Z82202.1-201ENST00000623446 1880 ntBASIC16.46■□□□□ 0.23
NKX6-1P78426 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
NKX6-1P78426 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 TSPY21P-201ENST00000433481 731 ntBASIC16.46■□□□□ 0.23
NKX6-1P78426 DUSP5P1-201ENST00000441325 1139 ntBASIC16.46■□□□□ 0.23
NKX6-1P78426 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.46■□□□□ 0.23
NKX6-1P78426 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.46■□□□□ 0.23
NKX6-1P78426 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms