Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.45■□□□□ 0.7
IRX4P78413 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.45■□□□□ 0.7
IRX4P78413 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.45■□□□□ 0.7
IRX4P78413 AC139887.4-201ENST00000607877 719 ntBASIC19.45■□□□□ 0.7
IRX4P78413 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.45■□□□□ 0.7
IRX4P78413 MYC-208ENST00000641036 567 ntBASIC19.45■□□□□ 0.7
IRX4P78413 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX4P78413 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 AC004980.1-204ENST00000429707 299 ntBASIC19.44■□□□□ 0.7
IRX4P78413 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 KRT126P-201ENST00000549467 1181 ntBASIC19.44■□□□□ 0.7
IRX4P78413 SLC25A1P4-201ENST00000567977 778 ntBASIC19.44■□□□□ 0.7
IRX4P78413 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.44■□□□□ 0.7
IRX4P78413 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.44■□□□□ 0.7
IRX4P78413 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IRX4P78413 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
IRX4P78413 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
IRX4P78413 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.43■□□□□ 0.7
IRX4P78413 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 RNF152P1-201ENST00000397754 604 ntBASIC19.43■□□□□ 0.7
IRX4P78413 FAM8A6P-201ENST00000407496 1135 ntBASIC19.43■□□□□ 0.7
IRX4P78413 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.43■□□□□ 0.7
IRX4P78413 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
IRX4P78413 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
IRX4P78413 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.43■□□□□ 0.7
IRX4P78413 AC131212.4-201ENST00000623606 975 ntBASIC19.43■□□□□ 0.7
IRX4P78413 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
IRX4P78413 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.43■□□□□ 0.7
IRX4P78413 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
IRX4P78413 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IRX4P78413 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX4P78413 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
IRX4P78413 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 HMGA1P5-201ENST00000412453 271 ntBASIC19.42■□□□□ 0.7
IRX4P78413 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.42■□□□□ 0.7
IRX4P78413 TPM4P1-201ENST00000436100 807 ntBASIC19.42■□□□□ 0.7
IRX4P78413 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX4P78413 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.42■□□□□ 0.7
IRX4P78413 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX4P78413 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
IRX4P78413 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX4P78413 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms