Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.09□□□□□ -0.31
CKS1BP61024 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 AC100791.3-201ENST00000617619 330 ntBASIC13.09□□□□□ -0.31
CKS1BP61024 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS1BP61024 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS1BP61024 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CKS1BP61024 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS1BP61024 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CKS1BP61024 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CKS1BP61024 AC135776.1-201ENST00000319817 2481 ntBASIC13.08□□□□□ -0.31
CKS1BP61024 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS1BP61024 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS1BP61024 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS1BP61024 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CKS1BP61024 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS1BP61024 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.08□□□□□ -0.31
CKS1BP61024 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS1BP61024 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.08□□□□□ -0.32
CKS1BP61024 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.08□□□□□ -0.32
CKS1BP61024 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CKS1BP61024 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.08□□□□□ -0.32
CKS1BP61024 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 AC007322.4-201ENST00000509611 723 ntBASIC13.08□□□□□ -0.32
CKS1BP61024 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS1BP61024 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS1BP61024 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.08□□□□□ -0.32
CKS1BP61024 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.08□□□□□ -0.32
CKS1BP61024 AC105020.6-201ENST00000621523 1217 ntBASIC13.08□□□□□ -0.32
CKS1BP61024 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS1BP61024 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms