Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN20P56880 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.16■□□□□ 0.34
CLDN20P56880 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CLDN20P56880 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLDN20P56880 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN20P56880 AC145285.6-201ENST00000604632 637 ntBASIC17.16■□□□□ 0.34
CLDN20P56880 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.16■□□□□ 0.34
CLDN20P56880 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 TEX21P-204ENST00000641479 1693 ntBASIC17.16■□□□□ 0.34
CLDN20P56880 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 AC104581.1-202ENST00000635932 2618 ntBASIC17.16■□□□□ 0.34
CLDN20P56880 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN20P56880 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN20P56880 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 NOC2LP1-202ENST00000452600 2235 ntBASIC17.15■□□□□ 0.34
CLDN20P56880 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN20P56880 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.15■□□□□ 0.34
CLDN20P56880 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN20P56880 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN20P56880 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN20P56880 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN20P56880 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN20P56880 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN20P56880 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN20P56880 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLDN20P56880 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
CLDN20P56880 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN20P56880 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLDN20P56880 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN20P56880 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN20P56880 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLDN20P56880 TSPY14P-201ENST00000303979 915 ntBASIC17.14■□□□□ 0.33
CLDN20P56880 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 INGX-201ENST00000359239 846 ntBASIC17.14■□□□□ 0.33
CLDN20P56880 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN20P56880 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN20P56880 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN20P56880 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN20P56880 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.14■□□□□ 0.33
CLDN20P56880 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN20P56880 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN20P56880 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLDN20P56880 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CLDN20P56880 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.13■□□□□ 0.33
CLDN20P56880 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CLDN20P56880 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN20P56880 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 EGLN1P1-201ENST00000531623 762 ntBASIC17.13■□□□□ 0.33
CLDN20P56880 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 FZD10-202ENST00000539839 3282 ntBASIC17.13■□□□□ 0.33
CLDN20P56880 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN20P56880 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms