Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.51■□□□□ 0.55
CDKN2DP55273 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.51■□□□□ 0.55
CDKN2DP55273 AC097488.1-201ENST00000507834 756 ntBASIC18.51■□□□□ 0.55
CDKN2DP55273 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.51■□□□□ 0.55
CDKN2DP55273 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.51■□□□□ 0.55
CDKN2DP55273 AP001412.1-201ENST00000608405 714 ntBASIC18.51■□□□□ 0.55
CDKN2DP55273 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CDKN2DP55273 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2DP55273 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN2DP55273 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 AC008556.1-201ENST00000610908 2040 ntBASIC18.5■□□□□ 0.55
CDKN2DP55273 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.5■□□□□ 0.55
CDKN2DP55273 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKN2DP55273 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
CDKN2DP55273 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDKN2DP55273 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.5■□□□□ 0.55
CDKN2DP55273 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.5■□□□□ 0.55
CDKN2DP55273 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
CDKN2DP55273 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.5■□□□□ 0.55
CDKN2DP55273 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.5■□□□□ 0.55
CDKN2DP55273 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.5■□□□□ 0.55
CDKN2DP55273 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKN2DP55273 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2DP55273 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2DP55273 AIRN-201ENST00000601203 4374 ntBASIC18.49■□□□□ 0.55
CDKN2DP55273 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CDKN2DP55273 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKN2DP55273 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKN2DP55273 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CDKN2DP55273 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 AL355355.2-201ENST00000442321 338 ntBASIC18.49■□□□□ 0.55
CDKN2DP55273 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2DP55273 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.49■□□□□ 0.55
CDKN2DP55273 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.49■□□□□ 0.55
CDKN2DP55273 AC026471.5-201ENST00000615068 467 ntBASIC18.49■□□□□ 0.55
CDKN2DP55273 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2DP55273 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKN2DP55273 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDKN2DP55273 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 GPAT2P1-201ENST00000444924 1672 ntBASIC18.48■□□□□ 0.55
CDKN2DP55273 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 AL109659.2-201ENST00000606809 1674 ntBASIC18.48■□□□□ 0.55
CDKN2DP55273 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDKN2DP55273 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKN2DP55273 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKN2DP55273 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKN2DP55273 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKN2DP55273 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKN2DP55273 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKN2DP55273 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDKN2DP55273 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2DP55273 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms