Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATXN3P54252 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
ATXN3P54252 TMEM179-206ENST00000616017 1645 ntBASIC19.11■□□□□ 0.65
ATXN3P54252 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATXN3P54252 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.1■□□□□ 0.65
ATXN3P54252 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.1■□□□□ 0.65
ATXN3P54252 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.1■□□□□ 0.65
ATXN3P54252 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.1■□□□□ 0.65
ATXN3P54252 AC069148.1-201ENST00000608741 768 ntBASIC19.1■□□□□ 0.65
ATXN3P54252 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATXN3P54252 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATXN3P54252 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.1■□□□□ 0.65
ATXN3P54252 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATXN3P54252 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATXN3P54252 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.09■□□□□ 0.65
ATXN3P54252 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.09■□□□□ 0.65
ATXN3P54252 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.09■□□□□ 0.65
ATXN3P54252 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 DUSP5P1-201ENST00000441325 1139 ntBASIC19.09■□□□□ 0.65
ATXN3P54252 AL023973.1-201ENST00000624619 620 ntBASIC19.09■□□□□ 0.65
ATXN3P54252 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.09■□□□□ 0.65
ATXN3P54252 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATXN3P54252 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
ATXN3P54252 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.09■□□□□ 0.65
ATXN3P54252 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATXN3P54252 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATXN3P54252 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATXN3P54252 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.08■□□□□ 0.64
ATXN3P54252 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.08■□□□□ 0.64
ATXN3P54252 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.08■□□□□ 0.64
ATXN3P54252 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.08■□□□□ 0.64
ATXN3P54252 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.08■□□□□ 0.64
ATXN3P54252 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.08■□□□□ 0.64
ATXN3P54252 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.08■□□□□ 0.64
ATXN3P54252 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.08■□□□□ 0.64
ATXN3P54252 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATXN3P54252 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATXN3P54252 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 AC005332.1-201ENST00000577698 1310 ntBASIC19.07■□□□□ 0.64
ATXN3P54252 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
ATXN3P54252 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 AP000523.1-201ENST00000398242 1049 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms