Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC25A1P53007 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC25A1P53007 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC25A1P53007 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC25A1P53007 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC25A1P53007 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 AC006058.3-201ENST00000606217 1069 ntBASIC16.65■□□□□ 0.26
SLC25A1P53007 AC130371.2-201ENST00000619443 611 ntBASIC16.65■□□□□ 0.26
SLC25A1P53007 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC25A1P53007 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC25A1P53007 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC25A1P53007 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 LETM1P2-201ENST00000597330 2178 ntBASIC16.64■□□□□ 0.25
SLC25A1P53007 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 KRT18P41-201ENST00000518924 1277 ntBASIC16.64■□□□□ 0.25
SLC25A1P53007 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC25A1P53007 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SLC25A1P53007 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.64■□□□□ 0.25
SLC25A1P53007 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC25A1P53007 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC25A1P53007 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SLC25A1P53007 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.63■□□□□ 0.25
SLC25A1P53007 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC25A1P53007 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC25A1P53007 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 FAM207BP-201ENST00000447172 505 ntBASIC16.63■□□□□ 0.25
SLC25A1P53007 AC008040.2-201ENST00000461049 708 ntBASIC16.63■□□□□ 0.25
SLC25A1P53007 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.63■□□□□ 0.25
SLC25A1P53007 AC073195.1-201ENST00000607241 877 ntBASIC16.63■□□□□ 0.25
SLC25A1P53007 CR392000.1-201ENST00000624770 1228 ntBASIC16.63■□□□□ 0.25
SLC25A1P53007 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC25A1P53007 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC25A1P53007 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC25A1P53007 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 AC128676.1-201ENST00000454392 318 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms