Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CDK7P50613 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.68■□□□□ 0.9
CDK7P50613 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK7P50613 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDK7P50613 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK7P50613 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK7P50613 BX640515.1-201ENST00000617215 977 ntBASIC20.67■□□□□ 0.9
CDK7P50613 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK7P50613 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK7P50613 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK7P50613 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK7P50613 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 AKR1C7P-201ENST00000305623 895 ntBASIC20.66■□□□□ 0.9
CDK7P50613 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 AP000593.1-201ENST00000393668 712 ntBASIC20.66■□□□□ 0.9
CDK7P50613 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK7P50613 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK7P50613 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK7P50613 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDK7P50613 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK7P50613 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 LINC00167-201ENST00000530583 1419 ntBASIC20.66■□□□□ 0.9
CDK7P50613 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDK7P50613 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK7P50613 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK7P50613 AC008556.1-201ENST00000610908 2040 ntBASIC20.66■□□□□ 0.9
CDK7P50613 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDK7P50613 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK7P50613 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK7P50613 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDK7P50613 AL512353.2-201ENST00000448759 1962 ntBASIC20.65■□□□□ 0.9
CDK7P50613 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK7P50613 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDK7P50613 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK7P50613 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 AC099336.1-202ENST00000602961 463 ntBASIC20.65■□□□□ 0.9
CDK7P50613 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK7P50613 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK7P50613 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDK7P50613 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK7P50613 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK7P50613 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.64■□□□□ 0.9
CDK7P50613 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK7P50613 RCC2P3-201ENST00000418112 1537 ntBASIC20.64■□□□□ 0.9
CDK7P50613 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 RN7SL606P-201ENST00000472779 293 ntBASIC20.64■□□□□ 0.89
CDK7P50613 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK7P50613 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.64■□□□□ 0.89
CDK7P50613 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 Z69720.1-201ENST00000601483 472 ntBASIC20.64■□□□□ 0.89
CDK7P50613 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK7P50613 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDK7P50613 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK7P50613 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK7P50613 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms