Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC067852.2-201ENST00000590513 2313 ntBASIC16.5■□□□□ 0.23
SOX2P48431 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SOX2P48431 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.5■□□□□ 0.23
SOX2P48431 TSPY23P-201ENST00000440136 739 ntBASIC16.5■□□□□ 0.23
SOX2P48431 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.5■□□□□ 0.23
SOX2P48431 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.5■□□□□ 0.23
SOX2P48431 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX2P48431 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX2P48431 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
SOX2P48431 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX2P48431 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.5■□□□□ 0.23
SOX2P48431 MYC-209ENST00000641252 345 ntBASIC16.5■□□□□ 0.23
SOX2P48431 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SOX2P48431 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX2P48431 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 AC073592.3-201ENST00000625118 1834 ntBASIC16.49■□□□□ 0.23
SOX2P48431 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SOX2P48431 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SOX2P48431 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 GUSBP6-202ENST00000438529 1198 ntBASIC16.49■□□□□ 0.23
SOX2P48431 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SOX2P48431 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SOX2P48431 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX2P48431 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX2P48431 AC008687.6-201ENST00000596318 630 ntBASIC16.49■□□□□ 0.23
SOX2P48431 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SOX2P48431 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX2P48431 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX2P48431 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
SOX2P48431 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 TSPY6P-201ENST00000448518 926 ntBASIC16.48■□□□□ 0.23
SOX2P48431 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 AL160286.2-201ENST00000567150 934 ntBASIC16.48■□□□□ 0.23
SOX2P48431 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SOX2P48431 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SOX2P48431 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX2P48431 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SOX2P48431 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX2P48431 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.47■□□□□ 0.23
SOX2P48431 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.47■□□□□ 0.23
SOX2P48431 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.47■□□□□ 0.23
SOX2P48431 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.47■□□□□ 0.23
SOX2P48431 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms