Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A12P48065 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC6A12P48065 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC6A12P48065 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC6A12P48065 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A12P48065 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A12P48065 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 BICD1-207ENST00000551848 1962 ntBASIC18.06■□□□□ 0.48
SLC6A12P48065 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A12P48065 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A12P48065 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SLC6A12P48065 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A12P48065 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A12P48065 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A12P48065 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 AC135050.7-201ENST00000624508 2218 ntBASIC18.05■□□□□ 0.48
SLC6A12P48065 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A12P48065 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A12P48065 CCR12P-201ENST00000446203 998 ntBASIC18.05■□□□□ 0.48
SLC6A12P48065 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC6A12P48065 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC6A12P48065 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC6A12P48065 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC6A12P48065 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC6A12P48065 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC6A12P48065 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 TSPY14P-201ENST00000303979 915 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 AC007663.1-201ENST00000438948 1240 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC6A12P48065 AC093827.2-201ENST00000512654 315 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 C2orf69P3-201ENST00000565542 1120 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC6A12P48065 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 AC034236.2-201ENST00000606662 1610 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 KRT8P9-201ENST00000558927 1449 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
SLC6A12P48065 MYLKP1-201ENST00000509077 1580 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 AC036111.1-201ENST00000533973 1582 ntBASIC18.04■□□□□ 0.48
SLC6A12P48065 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC6A12P48065 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SLC6A12P48065 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC6A12P48065 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms