Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.63□□□□□ -0.39
CXCL5P42830 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.63□□□□□ -0.39
CXCL5P42830 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 AC105036.2-201ENST00000569468 176 ntBASIC12.63□□□□□ -0.39
CXCL5P42830 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.63□□□□□ -0.39
CXCL5P42830 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CXCL5P42830 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CXCL5P42830 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 ABALON-201ENST00000629058 1903 ntBASIC12.62□□□□□ -0.39
CXCL5P42830 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL5P42830 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
CXCL5P42830 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
CXCL5P42830 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.62□□□□□ -0.39
CXCL5P42830 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.62□□□□□ -0.39
CXCL5P42830 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL5P42830 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL5P42830 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 AC006557.6-201ENST00000623071 864 ntBASIC12.62□□□□□ -0.39
CXCL5P42830 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.62□□□□□ -0.39
CXCL5P42830 MYC-208ENST00000641036 567 ntBASIC12.62□□□□□ -0.39
CXCL5P42830 FER1L4-210ENST00000615531 5998 ntBASIC12.62□□□□□ -0.39
CXCL5P42830 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL5P42830 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CXCL5P42830 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL5P42830 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CXCL5P42830 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CXCL5P42830 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CXCL5P42830 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL5P42830 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CXCL5P42830 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL5P42830 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CXCL5P42830 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL5P42830 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms