Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT9P35527 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT9P35527 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT9P35527 FAM197Y4-202ENST00000622692 608 ntBASIC20.49■□□□□ 0.87
KRT9P35527 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
KRT9P35527 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
KRT9P35527 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT9P35527 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT9P35527 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRT9P35527 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT9P35527 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.48■□□□□ 0.87
KRT9P35527 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KRT9P35527 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
KRT9P35527 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT9P35527 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT9P35527 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
KRT9P35527 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT9P35527 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
KRT9P35527 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KRT9P35527 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.47■□□□□ 0.87
KRT9P35527 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
KRT9P35527 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
KRT9P35527 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 HEIH-201ENST00000623091 1652 ntBASIC20.47■□□□□ 0.87
KRT9P35527 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT9P35527 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT9P35527 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT9P35527 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
KRT9P35527 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.46■□□□□ 0.87
KRT9P35527 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
KRT9P35527 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.46■□□□□ 0.87
KRT9P35527 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT9P35527 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT9P35527 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT9P35527 AL359736.2-201ENST00000621992 437 ntBASIC20.46■□□□□ 0.87
KRT9P35527 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.46■□□□□ 0.87
KRT9P35527 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT9P35527 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KRT9P35527 KRT8P41-201ENST00000533985 1514 ntBASIC20.46■□□□□ 0.87
KRT9P35527 HTR7P1-201ENST00000538670 1336 ntBASIC20.46■□□□□ 0.87
KRT9P35527 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRT9P35527 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT9P35527 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT9P35527 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT9P35527 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
KRT9P35527 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT9P35527 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KRT9P35527 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT9P35527 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT9P35527 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms