Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.23■□□□□ 0.51
EPHA3P29320 AC098934.4-201ENST00000564127 592 ntBASIC18.23■□□□□ 0.51
EPHA3P29320 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.23■□□□□ 0.51
EPHA3P29320 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
EPHA3P29320 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EPHA3P29320 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
EPHA3P29320 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.22■□□□□ 0.51
EPHA3P29320 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.22■□□□□ 0.51
EPHA3P29320 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.22■□□□□ 0.51
EPHA3P29320 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.22■□□□□ 0.51
EPHA3P29320 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.22■□□□□ 0.51
EPHA3P29320 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
EPHA3P29320 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.22■□□□□ 0.51
EPHA3P29320 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 ESPNP-201ENST00000270691 2015 ntBASIC18.22■□□□□ 0.51
EPHA3P29320 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EPHA3P29320 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EPHA3P29320 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHA3P29320 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHA3P29320 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
EPHA3P29320 MIR935-201ENST00000401179 91 ntBASIC18.21■□□□□ 0.51
EPHA3P29320 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.21■□□□□ 0.51
EPHA3P29320 NCF1B-203ENST00000435988 1254 ntBASIC18.21■□□□□ 0.51
EPHA3P29320 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.21■□□□□ 0.51
EPHA3P29320 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.21■□□□□ 0.51
EPHA3P29320 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 C1QL1P1-201ENST00000568105 661 ntBASIC18.21■□□□□ 0.51
EPHA3P29320 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
EPHA3P29320 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
EPHA3P29320 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
EPHA3P29320 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.21■□□□□ 0.51
EPHA3P29320 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
EPHA3P29320 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
EPHA3P29320 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EPHA3P29320 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
EPHA3P29320 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
EPHA3P29320 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.2■□□□□ 0.5
EPHA3P29320 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms