Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 KRASP1-201ENST00000407852 552 ntBASIC17.41■□□□□ 0.38
TNFRSF1BP20333 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.41■□□□□ 0.38
TNFRSF1BP20333 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF1BP20333 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 KRT8P11-201ENST00000409686 1436 ntBASIC17.4■□□□□ 0.38
TNFRSF1BP20333 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 HLA-L-209ENST00000420110 1011 ntBASIC17.4■□□□□ 0.38
TNFRSF1BP20333 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF1BP20333 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNFRSF1BP20333 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 POU5F1P3-201ENST00000428824 1078 ntBASIC17.39■□□□□ 0.37
TNFRSF1BP20333 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 AC068587.9-201ENST00000641814 219 ntBASIC17.39■□□□□ 0.37
TNFRSF1BP20333 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF1BP20333 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms