Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL2P13500 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCL2P13500 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CCL2P13500 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCL2P13500 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL2P13500 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CCL2P13500 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL2P13500 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL2P13500 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL2P13500 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL2P13500 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL2P13500 HEIH-201ENST00000623091 1652 ntBASIC16.3■□□□□ 0.2
CCL2P13500 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL2P13500 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 KRT18P22-201ENST00000402024 1347 ntBASIC16.3■□□□□ 0.2
CCL2P13500 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL2P13500 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL2P13500 AC145285.6-201ENST00000604632 637 ntBASIC16.3■□□□□ 0.2
CCL2P13500 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 AC083906.6-201ENST00000641366 219 ntBASIC16.3■□□□□ 0.2
CCL2P13500 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL2P13500 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL2P13500 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 FAM87A-204ENST00000613235 858 ntBASIC16.29■□□□□ 0.2
CCL2P13500 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 AC068587.9-201ENST00000641814 219 ntBASIC16.29■□□□□ 0.2
CCL2P13500 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL2P13500 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL2P13500 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL2P13500 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL2P13500 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL2P13500 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.28■□□□□ 0.2
CCL2P13500 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL2P13500 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 MCCD1P1-208ENST00000445732 328 ntBASIC16.28■□□□□ 0.2
CCL2P13500 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL2P13500 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCL2P13500 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms