Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.27■■□□□ 1
COL11A1P12107 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.27■■□□□ 1
COL11A1P12107 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.27■■□□□ 1
COL11A1P12107 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A1P12107 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL11A1P12107 AP003733.1-201ENST00000491725 852 ntBASIC21.27■□□□□ 0.99
COL11A1P12107 AP000867.3-201ENST00000524675 377 ntBASIC21.27■□□□□ 0.99
COL11A1P12107 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL11A1P12107 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
COL11A1P12107 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.27■□□□□ 0.99
COL11A1P12107 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A1P12107 KRT17P6-201ENST00000453795 1220 ntBASIC21.26■□□□□ 0.99
COL11A1P12107 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A1P12107 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
COL11A1P12107 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A1P12107 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.26■□□□□ 0.99
COL11A1P12107 AL161938.1-201ENST00000569833 2180 ntBASIC21.26■□□□□ 0.99
COL11A1P12107 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A1P12107 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL11A1P12107 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COL11A1P12107 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A1P12107 IGHGP-201ENST00000390555 1178 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 TSPY19P-201ENST00000418461 509 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.25■□□□□ 0.99
COL11A1P12107 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.25■□□□□ 0.99
COL11A1P12107 TSPY18P-201ENST00000441642 509 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 SLC25A6P4-201ENST00000586535 553 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 AC005336.2-201ENST00000593183 939 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A1P12107 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 AC007952.6-201ENST00000573168 2673 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 AC003957.1-201ENST00000625108 2673 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
COL11A1P12107 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL11A1P12107 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A1P12107 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.25■□□□□ 0.99
COL11A1P12107 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL11A1P12107 AC099336.1-202ENST00000602961 463 ntBASIC21.25■□□□□ 0.99
COL11A1P12107 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.25■□□□□ 0.99
COL11A1P12107 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A1P12107 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.25■□□□□ 0.99
COL11A1P12107 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A1P12107 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A1P12107 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A1P12107 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.24■□□□□ 0.99
COL11A1P12107 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A1P12107 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.24■□□□□ 0.99
COL11A1P12107 AP005901.3-202ENST00000581653 237 ntBASIC21.24■□□□□ 0.99
COL11A1P12107 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
COL11A1P12107 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL11A1P12107 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.24■□□□□ 0.99
COL11A1P12107 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A1P12107 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
COL11A1P12107 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A1P12107 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.23■□□□□ 0.99
COL11A1P12107 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.23■□□□□ 0.99
COL11A1P12107 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.23■□□□□ 0.99
COL11A1P12107 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL11A1P12107 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms