Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP9P0CG40 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP9P0CG40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
SP9P0CG40 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP9P0CG40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SP9P0CG40 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SP9P0CG40 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SP9P0CG40 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SP9P0CG40 AC092910.1-201ENST00000482027 1129 ntBASIC18.41■□□□□ 0.54
SP9P0CG40 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.41■□□□□ 0.54
SP9P0CG40 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.41■□□□□ 0.54
SP9P0CG40 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.41■□□□□ 0.54
SP9P0CG40 AC021087.4-201ENST00000563761 564 ntBASIC18.41■□□□□ 0.54
SP9P0CG40 AP001269.4-201ENST00000609611 512 ntBASIC18.41■□□□□ 0.54
SP9P0CG40 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SP9P0CG40 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.41■□□□□ 0.54
SP9P0CG40 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SP9P0CG40 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SP9P0CG40 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 TP73-AS1-210ENST00000637775 1455 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 AC026310.3-201ENST00000625186 2373 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.4■□□□□ 0.54
SP9P0CG40 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.4■□□□□ 0.54
SP9P0CG40 RPS2P1-201ENST00000434010 821 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 DNAJB3-202ENST00000449667 1266 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SP9P0CG40 RNA5SP415-201ENST00000517246 115 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.4■□□□□ 0.54
SP9P0CG40 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.4■□□□□ 0.54
SP9P0CG40 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.4■□□□□ 0.54
SP9P0CG40 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 HLA-J-201ENST00000462773 1622 ntBASIC18.4■□□□□ 0.54
SP9P0CG40 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SP9P0CG40 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.4■□□□□ 0.54
SP9P0CG40 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.4■□□□□ 0.54
SP9P0CG40 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SP9P0CG40 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SP9P0CG40 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SP9P0CG40 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SP9P0CG40 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.39■□□□□ 0.54
SP9P0CG40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.39■□□□□ 0.53
SP9P0CG40 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.39■□□□□ 0.53
SP9P0CG40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.39■□□□□ 0.53
SP9P0CG40 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SP9P0CG40 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SP9P0CG40 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.39■□□□□ 0.53
SP9P0CG40 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SP9P0CG40 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SP9P0CG40 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SP9P0CG40 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
SP9P0CG40 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
SP9P0CG40 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.38■□□□□ 0.53
SP9P0CG40 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.38■□□□□ 0.53
SP9P0CG40 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.38■□□□□ 0.53
SP9P0CG40 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.38■□□□□ 0.53
SP9P0CG40 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.38■□□□□ 0.53
SP9P0CG40 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.38■□□□□ 0.53
SP9P0CG40 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.38■□□□□ 0.53
SP9P0CG40 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
SP9P0CG40 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.38■□□□□ 0.53
SP9P0CG40 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.38■□□□□ 0.53
SP9P0CG40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.38■□□□□ 0.53
SP9P0CG40 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SP9P0CG40 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms