Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC079776.4-201ENST00000511039 504 ntBASIC18.86■□□□□ 0.61
COL4A2P08572 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL4A2P08572 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A2P08572 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.85■□□□□ 0.61
COL4A2P08572 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 MIR574-201ENST00000385209 96 ntBASIC18.85■□□□□ 0.61
COL4A2P08572 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.85■□□□□ 0.61
COL4A2P08572 FEM1AP3-201ENST00000403722 1741 ntBASIC18.85■□□□□ 0.61
COL4A2P08572 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A2P08572 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL4A2P08572 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A2P08572 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A2P08572 AC008608.2-201ENST00000606089 416 ntBASIC18.85■□□□□ 0.61
COL4A2P08572 AL357033.4-201ENST00000617703 1807 ntBASIC18.85■□□□□ 0.61
COL4A2P08572 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A2P08572 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
COL4A2P08572 KRT18P67-201ENST00000432816 1264 ntBASIC18.84■□□□□ 0.61
COL4A2P08572 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A2P08572 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A2P08572 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.84■□□□□ 0.61
COL4A2P08572 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A2P08572 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.84■□□□□ 0.61
COL4A2P08572 AC148477.8-201ENST00000624298 468 ntBASIC18.84■□□□□ 0.61
COL4A2P08572 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A2P08572 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL4A2P08572 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COL4A2P08572 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A2P08572 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A2P08572 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A2P08572 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A2P08572 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.83■□□□□ 0.61
COL4A2P08572 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A2P08572 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A2P08572 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
COL4A2P08572 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.83■□□□□ 0.61
COL4A2P08572 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A2P08572 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A2P08572 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.83■□□□□ 0.61
COL4A2P08572 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A2P08572 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A2P08572 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A2P08572 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COL4A2P08572 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A2P08572 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A2P08572 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A2P08572 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
COL4A2P08572 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A2P08572 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A2P08572 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.83■□□□□ 0.6
COL4A2P08572 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL4A2P08572 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A2P08572 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
COL4A2P08572 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A2P08572 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.82■□□□□ 0.6
COL4A2P08572 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.82■□□□□ 0.6
COL4A2P08572 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A2P08572 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A2P08572 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 AC141586.3-201ENST00000562166 1838 ntBASIC18.82■□□□□ 0.6
COL4A2P08572 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL4A2P08572 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL4A2P08572 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.81■□□□□ 0.6
COL4A2P08572 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL4A2P08572 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A2P08572 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.81■□□□□ 0.6
COL4A2P08572 AC113404.2-201ENST00000507884 177 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms