Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.83■□□□□ 0.6
MMP2P08253 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP2P08253 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP2P08253 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MMP2P08253 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.82■□□□□ 0.6
MMP2P08253 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
MMP2P08253 AC104581.1-202ENST00000635932 2618 ntBASIC18.82■□□□□ 0.6
MMP2P08253 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.82■□□□□ 0.6
MMP2P08253 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.82■□□□□ 0.6
MMP2P08253 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.82■□□□□ 0.6
MMP2P08253 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 AC010203.1-204ENST00000548782 407 ntBASIC18.82■□□□□ 0.6
MMP2P08253 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
MMP2P08253 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
MMP2P08253 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 AC009113.1-201ENST00000570267 2443 ntBASIC18.82■□□□□ 0.6
MMP2P08253 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
MMP2P08253 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 AC112777.1-201ENST00000540175 1423 ntBASIC18.82■□□□□ 0.6
MMP2P08253 KRT8P50-201ENST00000562022 1438 ntBASIC18.82■□□□□ 0.6
MMP2P08253 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP2P08253 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP2P08253 AL138966.2-201ENST00000621997 464 ntBASIC18.81■□□□□ 0.6
MMP2P08253 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
MMP2P08253 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP2P08253 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MMP2P08253 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.8■□□□□ 0.6
MMP2P08253 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP2P08253 ECEL1P3-201ENST00000427961 737 ntBASIC18.8■□□□□ 0.6
MMP2P08253 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP2P08253 AC009947.2-201ENST00000444014 672 ntBASIC18.8■□□□□ 0.6
MMP2P08253 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP2P08253 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MMP2P08253 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.8■□□□□ 0.6
MMP2P08253 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP2P08253 HOXB1-202ENST00000577092 1414 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms