Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TPM3P06753 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
TPM3P06753 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 AC009053.2-201ENST00000563701 2365 ntBASIC20.99■□□□□ 0.95
TPM3P06753 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.99■□□□□ 0.95
TPM3P06753 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.99■□□□□ 0.95
TPM3P06753 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
TPM3P06753 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM3P06753 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TPM3P06753 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM3P06753 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM3P06753 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TPM3P06753 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 AF201337.1-201ENST00000520239 748 ntBASIC20.98■□□□□ 0.95
TPM3P06753 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM3P06753 AC006557.6-201ENST00000623071 864 ntBASIC20.98■□□□□ 0.95
TPM3P06753 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM3P06753 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TPM3P06753 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM3P06753 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TPM3P06753 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.97■□□□□ 0.95
TPM3P06753 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.97■□□□□ 0.95
TPM3P06753 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 TUBB8P6-201ENST00000436895 1288 ntBASIC20.97■□□□□ 0.95
TPM3P06753 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 AC105036.2-201ENST00000569468 176 ntBASIC20.97■□□□□ 0.95
TPM3P06753 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TPM3P06753 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TPM3P06753 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TPM3P06753 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.97■□□□□ 0.95
TPM3P06753 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TPM3P06753 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TPM3P06753 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.96■□□□□ 0.95
TPM3P06753 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 KRT18P16-201ENST00000510337 1294 ntBASIC20.96■□□□□ 0.95
TPM3P06753 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TPM3P06753 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.96■□□□□ 0.95
TPM3P06753 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms