Protein–RNA interactions for Protein: P03372

ESR1, Estrogen receptor, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1P03372 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.48■□□□□ 0.55
ESR1P03372 MIR1238-201ENST00000408483 83 ntBASIC18.48■□□□□ 0.55
ESR1P03372 CCR12P-201ENST00000446203 998 ntBASIC18.48■□□□□ 0.55
ESR1P03372 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.48■□□□□ 0.55
ESR1P03372 AL353719.1-201ENST00000566847 864 ntBASIC18.48■□□□□ 0.55
ESR1P03372 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.48■□□□□ 0.55
ESR1P03372 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ESR1P03372 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.48■□□□□ 0.55
ESR1P03372 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
ESR1P03372 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ESR1P03372 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 MIR564-202ENST00000385049 94 ntBASIC18.47■□□□□ 0.55
ESR1P03372 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.47■□□□□ 0.55
ESR1P03372 AL390955.1-201ENST00000428694 934 ntBASIC18.47■□□□□ 0.55
ESR1P03372 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 KRT18P41-201ENST00000518924 1277 ntBASIC18.47■□□□□ 0.55
ESR1P03372 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 C2orf69P3-201ENST00000565542 1120 ntBASIC18.47■□□□□ 0.55
ESR1P03372 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.47■□□□□ 0.55
ESR1P03372 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
ESR1P03372 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ESR1P03372 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.46■□□□□ 0.55
ESR1P03372 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ESR1P03372 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.46■□□□□ 0.55
ESR1P03372 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 AC009113.1-201ENST00000570267 2443 ntBASIC18.46■□□□□ 0.55
ESR1P03372 AL499627.1-201ENST00000569373 2188 ntBASIC18.46■□□□□ 0.55
ESR1P03372 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ESR1P03372 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.46■□□□□ 0.55
ESR1P03372 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
ESR1P03372 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ESR1P03372 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ESR1P03372 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
ESR1P03372 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ESR1P03372 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ESR1P03372 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.45■□□□□ 0.54
ESR1P03372 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.45■□□□□ 0.54
ESR1P03372 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.45■□□□□ 0.54
ESR1P03372 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ESR1P03372 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ESR1P03372 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms