Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD4P01730 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD4P01730 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD4P01730 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD4P01730 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.68■□□□□ 0.9
CD4P01730 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD4P01730 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.67■□□□□ 0.9
CD4P01730 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD4P01730 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
CD4P01730 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.67■□□□□ 0.9
CD4P01730 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD4P01730 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 AC104390.1-201ENST00000555663 520 ntBASIC20.67■□□□□ 0.9
CD4P01730 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.67■□□□□ 0.9
CD4P01730 AC090616.6-201ENST00000582640 721 ntBASIC20.67■□□□□ 0.9
CD4P01730 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.67■□□□□ 0.9
CD4P01730 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
CD4P01730 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.67■□□□□ 0.9
CD4P01730 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD4P01730 KRT8P7-201ENST00000533003 1432 ntBASIC20.67■□□□□ 0.9
CD4P01730 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD4P01730 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CD4P01730 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.66■□□□□ 0.9
CD4P01730 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 MRPL3P1-201ENST00000400109 1033 ntBASIC20.66■□□□□ 0.9
CD4P01730 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.66■□□□□ 0.9
CD4P01730 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.66■□□□□ 0.9
CD4P01730 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.66■□□□□ 0.9
CD4P01730 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 AC104819.1-201ENST00000504587 486 ntBASIC20.66■□□□□ 0.9
CD4P01730 AL662844.1-201ENST00000546340 181 ntBASIC20.66■□□□□ 0.9
CD4P01730 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CD4P01730 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.66■□□□□ 0.9
CD4P01730 AC005332.3-201ENST00000589904 676 ntBASIC20.66■□□□□ 0.9
CD4P01730 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.66■□□□□ 0.9
CD4P01730 AL121912.1-201ENST00000603683 238 ntBASIC20.66■□□□□ 0.9
CD4P01730 AL390719.2-201ENST00000606993 987 ntBASIC20.66■□□□□ 0.9
CD4P01730 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.66■□□□□ 0.9
CD4P01730 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.66■□□□□ 0.9
CD4P01730 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
CD4P01730 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD4P01730 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.65■□□□□ 0.9
CD4P01730 AL109659.2-201ENST00000606809 1674 ntBASIC20.65■□□□□ 0.9
CD4P01730 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CD4P01730 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CD4P01730 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.65■□□□□ 0.9
CD4P01730 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 KRT16P4-201ENST00000453883 522 ntBASIC20.65■□□□□ 0.9
CD4P01730 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.65■□□□□ 0.9
CD4P01730 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.65■□□□□ 0.9
CD4P01730 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
CD4P01730 AC010240.3-201ENST00000607688 395 ntBASIC20.65■□□□□ 0.9
CD4P01730 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.65■□□□□ 0.9
CD4P01730 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
CD4P01730 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CD4P01730 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD4P01730 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD4P01730 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
CD4P01730 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CD4P01730 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CD4P01730 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 HOXB1-202ENST00000577092 1414 ntBASIC20.64■□□□□ 0.89
CD4P01730 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.64■□□□□ 0.89
CD4P01730 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 AC233702.3-201ENST00000578656 1387 ntBASIC20.64■□□□□ 0.89
CD4P01730 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms