Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.31■□□□□ 0.36
LGI1O95970 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LGI1O95970 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.31■□□□□ 0.36
LGI1O95970 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LGI1O95970 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGI1O95970 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.3■□□□□ 0.36
LGI1O95970 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 ABALON-201ENST00000629058 1903 ntBASIC17.3■□□□□ 0.36
LGI1O95970 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.3■□□□□ 0.36
LGI1O95970 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
LGI1O95970 AL353807.1-201ENST00000427475 662 ntBASIC17.3■□□□□ 0.36
LGI1O95970 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.3■□□□□ 0.36
LGI1O95970 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.3■□□□□ 0.36
LGI1O95970 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LGI1O95970 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.3■□□□□ 0.36
LGI1O95970 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
LGI1O95970 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.3■□□□□ 0.36
LGI1O95970 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LGI1O95970 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGI1O95970 KRT16P1-201ENST00000399124 1418 ntBASIC17.3■□□□□ 0.36
LGI1O95970 AL133373.2-201ENST00000623187 2828 ntBASIC17.29■□□□□ 0.36
LGI1O95970 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 AL162741.1-201ENST00000565563 1558 ntBASIC17.29■□□□□ 0.36
LGI1O95970 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LGI1O95970 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LGI1O95970 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LGI1O95970 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.29■□□□□ 0.36
LGI1O95970 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.29■□□□□ 0.36
LGI1O95970 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.29■□□□□ 0.36
LGI1O95970 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LGI1O95970 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LGI1O95970 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGI1O95970 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.28■□□□□ 0.36
LGI1O95970 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LGI1O95970 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
LGI1O95970 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LGI1O95970 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.28■□□□□ 0.36
LGI1O95970 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LGI1O95970 AC026271.3-201ENST00000571884 352 ntBASIC17.28■□□□□ 0.36
LGI1O95970 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.28■□□□□ 0.36
LGI1O95970 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
LGI1O95970 AL031985.4-201ENST00000642138 673 ntBASIC17.28■□□□□ 0.36
LGI1O95970 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGI1O95970 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LGI1O95970 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms