Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 AL512604.3-201ENST00000569583 964 ntBASIC17.58■□□□□ 0.4
PRAMEF2O60811 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.4
PRAMEF2O60811 AC006333.2-201ENST00000607957 2099 ntBASIC17.58■□□□□ 0.4
PRAMEF2O60811 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PRAMEF2O60811 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF2O60811 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 AC117947.1-201ENST00000427448 529 ntBASIC17.57■□□□□ 0.4
PRAMEF2O60811 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.57■□□□□ 0.4
PRAMEF2O60811 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 AC022616.7-201ENST00000525383 220 ntBASIC17.57■□□□□ 0.4
PRAMEF2O60811 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF2O60811 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF2O60811 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 AC063952.2-201ENST00000498792 1227 ntBASIC17.56■□□□□ 0.4
PRAMEF2O60811 AC139887.4-201ENST00000607877 719 ntBASIC17.56■□□□□ 0.4
PRAMEF2O60811 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 AC098818.2-201ENST00000564925 2320 ntBASIC17.56■□□□□ 0.4
PRAMEF2O60811 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF2O60811 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF2O60811 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms