Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HCN1O60741 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
HCN1O60741 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.5■□□□□ 0.39
HCN1O60741 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HCN1O60741 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.5■□□□□ 0.39
HCN1O60741 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 CYP2D8P-201ENST00000433633 1490 ntBASIC17.5■□□□□ 0.39
HCN1O60741 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HCN1O60741 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
HCN1O60741 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 AL160286.2-201ENST00000567150 934 ntBASIC17.49■□□□□ 0.39
HCN1O60741 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
HCN1O60741 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
HCN1O60741 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCN1O60741 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.48■□□□□ 0.39
HCN1O60741 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 RCN1P1-201ENST00000400413 996 ntBASIC17.48■□□□□ 0.39
HCN1O60741 CRYGFP-201ENST00000418459 633 ntBASIC17.48■□□□□ 0.39
HCN1O60741 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 FAM207BP-201ENST00000447172 505 ntBASIC17.48■□□□□ 0.39
HCN1O60741 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 EGLN1P1-201ENST00000531623 762 ntBASIC17.48■□□□□ 0.39
HCN1O60741 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.48■□□□□ 0.39
HCN1O60741 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.48■□□□□ 0.39
HCN1O60741 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HCN1O60741 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HCN1O60741 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HCN1O60741 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
HCN1O60741 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCN1O60741 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms