Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ZIC3O60481 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.85■□□□□ 0.29
ZIC3O60481 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 HOMER2P1-201ENST00000455653 964 ntBASIC16.85■□□□□ 0.29
ZIC3O60481 SEC1P-202ENST00000473944 940 ntBASIC16.85■□□□□ 0.29
ZIC3O60481 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 NTF6B-201ENST00000591913 560 ntBASIC16.85■□□□□ 0.29
ZIC3O60481 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ZIC3O60481 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.85■□□□□ 0.29
ZIC3O60481 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZIC3O60481 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
ZIC3O60481 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.84■□□□□ 0.29
ZIC3O60481 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 AP000974.1-201ENST00000623909 2387 ntBASIC16.84■□□□□ 0.29
ZIC3O60481 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.84■□□□□ 0.29
ZIC3O60481 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ZIC3O60481 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.84■□□□□ 0.29
ZIC3O60481 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.84■□□□□ 0.29
ZIC3O60481 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 KRT18P35-201ENST00000510488 1269 ntBASIC16.84■□□□□ 0.29
ZIC3O60481 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.84■□□□□ 0.29
ZIC3O60481 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.84■□□□□ 0.29
ZIC3O60481 AL445228.2-201ENST00000605589 952 ntBASIC16.84■□□□□ 0.29
ZIC3O60481 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ZIC3O60481 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ZIC3O60481 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZIC3O60481 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ZIC3O60481 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZIC3O60481 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ZIC3O60481 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZIC3O60481 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.83■□□□□ 0.28
ZIC3O60481 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZIC3O60481 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.83■□□□□ 0.28
ZIC3O60481 KRT18P38-201ENST00000449496 1282 ntBASIC16.83■□□□□ 0.28
ZIC3O60481 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
ZIC3O60481 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.83■□□□□ 0.28
ZIC3O60481 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.83■□□□□ 0.28
ZIC3O60481 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZIC3O60481 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 AC104390.1-201ENST00000555663 520 ntBASIC16.83■□□□□ 0.28
ZIC3O60481 LINC01238-205ENST00000567549 1107 ntBASIC16.83■□□□□ 0.28
ZIC3O60481 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZIC3O60481 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.82■□□□□ 0.28
ZIC3O60481 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms