Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.43■□□□□ 0.7
MSI1O43347 TSPY5P-201ENST00000426936 936 ntBASIC19.43■□□□□ 0.7
MSI1O43347 AC063952.2-201ENST00000498792 1227 ntBASIC19.43■□□□□ 0.7
MSI1O43347 KRT18P35-201ENST00000510488 1269 ntBASIC19.43■□□□□ 0.7
MSI1O43347 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 AL445228.2-201ENST00000605589 952 ntBASIC19.43■□□□□ 0.7
MSI1O43347 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 AL357033.4-201ENST00000617703 1807 ntBASIC19.43■□□□□ 0.7
MSI1O43347 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
MSI1O43347 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MSI1O43347 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.42■□□□□ 0.7
MSI1O43347 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.42■□□□□ 0.7
MSI1O43347 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
MSI1O43347 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.42■□□□□ 0.7
MSI1O43347 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
MSI1O43347 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MSI1O43347 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 MIR564-202ENST00000385049 94 ntBASIC19.42■□□□□ 0.7
MSI1O43347 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MSI1O43347 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.42■□□□□ 0.7
MSI1O43347 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.42■□□□□ 0.7
MSI1O43347 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.42■□□□□ 0.7
MSI1O43347 AL359075.1-203ENST00000462729 1002 ntBASIC19.42■□□□□ 0.7
MSI1O43347 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.42■□□□□ 0.7
MSI1O43347 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.42■□□□□ 0.7
MSI1O43347 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.42■□□□□ 0.7
MSI1O43347 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.42■□□□□ 0.7
MSI1O43347 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.42■□□□□ 0.7
MSI1O43347 NTF6B-201ENST00000591913 560 ntBASIC19.42■□□□□ 0.7
MSI1O43347 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MSI1O43347 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSI1O43347 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MSI1O43347 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.41■□□□□ 0.7
MSI1O43347 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.41■□□□□ 0.7
MSI1O43347 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.41■□□□□ 0.7
MSI1O43347 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.41■□□□□ 0.7
MSI1O43347 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
MSI1O43347 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.41■□□□□ 0.7
MSI1O43347 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.41■□□□□ 0.7
MSI1O43347 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.41■□□□□ 0.7
MSI1O43347 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSI1O43347 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.41■□□□□ 0.7
MSI1O43347 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 AC087289.5-201ENST00000586076 3175 ntBASIC19.4■□□□□ 0.7
MSI1O43347 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 KRT18P38-201ENST00000449496 1282 ntBASIC19.4■□□□□ 0.7
MSI1O43347 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.4■□□□□ 0.7
MSI1O43347 AC092647.4-201ENST00000457211 535 ntBASIC19.4■□□□□ 0.7
MSI1O43347 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.4■□□□□ 0.7
MSI1O43347 AL590326.2-201ENST00000625139 305 ntBASIC19.4■□□□□ 0.7
MSI1O43347 AL031432.5-201ENST00000641059 760 ntBASIC19.4■□□□□ 0.7
MSI1O43347 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSI1O43347 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms