Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRANK1O15050 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRANK1O15050 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.68■□□□□ 0.74
TRANK1O15050 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRANK1O15050 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.68■□□□□ 0.74
TRANK1O15050 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRANK1O15050 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.68■□□□□ 0.74
TRANK1O15050 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRANK1O15050 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRANK1O15050 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.67■□□□□ 0.74
TRANK1O15050 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 AC116407.3-201ENST00000623905 1129 ntBASIC19.67■□□□□ 0.74
TRANK1O15050 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TRANK1O15050 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 MIR5100-201ENST00000579544 119 ntBASIC19.67■□□□□ 0.74
TRANK1O15050 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRANK1O15050 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
TRANK1O15050 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRANK1O15050 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TRANK1O15050 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.66■□□□□ 0.74
TRANK1O15050 MIR3180-4-201ENST00000582223 153 ntBASIC19.66■□□□□ 0.74
TRANK1O15050 AC005336.2-201ENST00000593183 939 ntBASIC19.66■□□□□ 0.74
TRANK1O15050 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.66■□□□□ 0.74
TRANK1O15050 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.66■□□□□ 0.74
TRANK1O15050 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.66■□□□□ 0.74
TRANK1O15050 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRANK1O15050 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 MED15P5-201ENST00000423150 992 ntBASIC19.66■□□□□ 0.74
TRANK1O15050 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
TRANK1O15050 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRANK1O15050 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.66■□□□□ 0.74
TRANK1O15050 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRANK1O15050 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRANK1O15050 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.65■□□□□ 0.74
TRANK1O15050 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.65■□□□□ 0.74
TRANK1O15050 AL591684.3-201ENST00000605187 298 ntBASIC19.65■□□□□ 0.74
TRANK1O15050 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 AP003733.1-201ENST00000491725 852 ntBASIC19.65■□□□□ 0.74
TRANK1O15050 AC024563.2-201ENST00000603282 481 ntBASIC19.65■□□□□ 0.74
TRANK1O15050 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.65■□□□□ 0.74
TRANK1O15050 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRANK1O15050 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.65■□□□□ 0.74
TRANK1O15050 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.65■□□□□ 0.74
TRANK1O15050 FAM215A-202ENST00000632077 792 ntBASIC19.65■□□□□ 0.74
TRANK1O15050 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.64■□□□□ 0.74
TRANK1O15050 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRANK1O15050 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.64■□□□□ 0.74
TRANK1O15050 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRANK1O15050 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 AC093909.1-201ENST00000504731 1122 ntBASIC19.64■□□□□ 0.73
TRANK1O15050 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.64■□□□□ 0.73
TRANK1O15050 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.64■□□□□ 0.73
TRANK1O15050 AC006333.2-201ENST00000607957 2099 ntBASIC19.64■□□□□ 0.73
TRANK1O15050 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRANK1O15050 RBM17P3-201ENST00000417687 1192 ntBASIC19.64■□□□□ 0.73
TRANK1O15050 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.64■□□□□ 0.73
TRANK1O15050 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.64■□□□□ 0.73
TRANK1O15050 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.64■□□□□ 0.73
TRANK1O15050 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRANK1O15050 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRANK1O15050 AC004832.2-201ENST00000426397 482 ntBASIC19.63■□□□□ 0.73
TRANK1O15050 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
TRANK1O15050 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.63■□□□□ 0.73
TRANK1O15050 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
TRANK1O15050 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms