Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDX4O14627 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.03■□□□□ 0.48
CDX4O14627 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
CDX4O14627 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.02■□□□□ 0.48
CDX4O14627 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.02■□□□□ 0.48
CDX4O14627 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDX4O14627 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.02■□□□□ 0.48
CDX4O14627 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.02■□□□□ 0.48
CDX4O14627 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 AC114341.1-201ENST00000618070 349 ntBASIC18.02■□□□□ 0.48
CDX4O14627 AL355877.3-201ENST00000622820 899 ntBASIC18.02■□□□□ 0.48
CDX4O14627 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDX4O14627 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDX4O14627 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDX4O14627 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDX4O14627 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.01■□□□□ 0.47
CDX4O14627 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CDX4O14627 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.01■□□□□ 0.47
CDX4O14627 AC096582.2-201ENST00000510860 516 ntBASIC18.01■□□□□ 0.47
CDX4O14627 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.01■□□□□ 0.47
CDX4O14627 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.01■□□□□ 0.47
CDX4O14627 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.01■□□□□ 0.47
CDX4O14627 LINC02084-201ENST00000606069 1096 ntBASIC18.01■□□□□ 0.47
CDX4O14627 AL355385.1-201ENST00000606123 409 ntBASIC18.01■□□□□ 0.47
CDX4O14627 AL139424.1-201ENST00000607572 797 ntBASIC18.01■□□□□ 0.47
CDX4O14627 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDX4O14627 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDX4O14627 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDX4O14627 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.01■□□□□ 0.47
CDX4O14627 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDX4O14627 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDX4O14627 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDX4O14627 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18■□□□□ 0.47
CDX4O14627 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 CYP51A1P1-201ENST00000492267 1507 ntBASIC18■□□□□ 0.47
CDX4O14627 SCARNA2-201ENST00000458748 420 ntBASIC18■□□□□ 0.47
CDX4O14627 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18■□□□□ 0.47
CDX4O14627 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18■□□□□ 0.47
CDX4O14627 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18■□□□□ 0.47
CDX4O14627 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18■□□□□ 0.47
CDX4O14627 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18■□□□□ 0.47
CDX4O14627 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDX4O14627 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDX4O14627 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18■□□□□ 0.47
CDX4O14627 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDX4O14627 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDX4O14627 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
CDX4O14627 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.99■□□□□ 0.47
CDX4O14627 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.99■□□□□ 0.47
CDX4O14627 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.99■□□□□ 0.47
CDX4O14627 FGFR3P6-201ENST00000457012 610 ntBASIC17.99■□□□□ 0.47
CDX4O14627 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.99■□□□□ 0.47
CDX4O14627 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.99■□□□□ 0.47
CDX4O14627 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 KRT8P32-201ENST00000512863 1461 ntBASIC17.99■□□□□ 0.47
CDX4O14627 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDX4O14627 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.99■□□□□ 0.47
CDX4O14627 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDX4O14627 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 AC099778.1-201ENST00000568593 1911 ntBASIC17.98■□□□□ 0.47
CDX4O14627 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms