Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.06■□□□□ 0.8
FOXN3O00409 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXN3O00409 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 AL023284.2-201ENST00000405850 579 ntBASIC20.06■□□□□ 0.8
FOXN3O00409 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.06■□□□□ 0.8
FOXN3O00409 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN3O00409 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
FOXN3O00409 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN3O00409 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FOXN3O00409 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXN3O00409 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXN3O00409 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXN3O00409 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN3O00409 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXN3O00409 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
FOXN3O00409 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FOXN3O00409 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN3O00409 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXN3O00409 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXN3O00409 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.05■□□□□ 0.8
FOXN3O00409 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
FOXN3O00409 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 RBM17P1-201ENST00000453646 1190 ntBASIC20.05■□□□□ 0.8
FOXN3O00409 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXN3O00409 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.05■□□□□ 0.8
FOXN3O00409 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 GPAT2P1-201ENST00000444924 1672 ntBASIC20.05■□□□□ 0.8
FOXN3O00409 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN3O00409 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXN3O00409 AC079598.2-202ENST00000546624 1451 ntBASIC20.05■□□□□ 0.8
FOXN3O00409 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN3O00409 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN3O00409 BICD1-207ENST00000551848 1962 ntBASIC20.04■□□□□ 0.8
FOXN3O00409 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN3O00409 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXN3O00409 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FOXN3O00409 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FOXN3O00409 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.04■□□□□ 0.8
FOXN3O00409 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN3O00409 AP006294.2-201ENST00000641667 209 ntBASIC20.04■□□□□ 0.8
FOXN3O00409 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FOXN3O00409 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN3O00409 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FOXN3O00409 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXN3O00409 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXN3O00409 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN3O00409 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.03■□□□□ 0.8
FOXN3O00409 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
FOXN3O00409 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXN3O00409 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 CA15P1-201ENST00000481698 905 ntBASIC20.03■□□□□ 0.8
FOXN3O00409 AP005242.2-201ENST00000580065 1175 ntBASIC20.03■□□□□ 0.8
FOXN3O00409 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
FOXN3O00409 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FOXN3O00409 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN3O00409 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms