Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3B1O00203 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.93■□□□□ 0.62
AP3B1O00203 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AP3B1O00203 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
AP3B1O00203 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.93■□□□□ 0.62
AP3B1O00203 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AP3B1O00203 MESTP1-201ENST00000404287 994 ntBASIC18.93■□□□□ 0.62
AP3B1O00203 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.93■□□□□ 0.62
AP3B1O00203 CA15P1-201ENST00000481698 905 ntBASIC18.93■□□□□ 0.62
AP3B1O00203 NUDT16P1-203ENST00000513809 620 ntBASIC18.93■□□□□ 0.62
AP3B1O00203 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.93■□□□□ 0.62
AP3B1O00203 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
AP3B1O00203 AL357033.4-201ENST00000617703 1807 ntBASIC18.93■□□□□ 0.62
AP3B1O00203 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3B1O00203 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3B1O00203 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
AP3B1O00203 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.92■□□□□ 0.62
AP3B1O00203 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.92■□□□□ 0.62
AP3B1O00203 BICD1-207ENST00000551848 1962 ntBASIC18.92■□□□□ 0.62
AP3B1O00203 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.92■□□□□ 0.62
AP3B1O00203 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 RPS2P55-201ENST00000397318 883 ntBASIC18.92■□□□□ 0.62
AP3B1O00203 AC107956.1-201ENST00000494359 873 ntBASIC18.92■□□□□ 0.62
AP3B1O00203 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.92■□□□□ 0.62
AP3B1O00203 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3B1O00203 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.92■□□□□ 0.62
AP3B1O00203 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AP3B1O00203 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3B1O00203 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
AP3B1O00203 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.91■□□□□ 0.62
AP3B1O00203 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
AP3B1O00203 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 PRORSD1P-201ENST00000295112 541 ntBASIC18.91■□□□□ 0.62
AP3B1O00203 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.91■□□□□ 0.62
AP3B1O00203 KRT18P41-201ENST00000518924 1277 ntBASIC18.91■□□□□ 0.62
AP3B1O00203 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.91■□□□□ 0.62
AP3B1O00203 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.91■□□□□ 0.62
AP3B1O00203 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.91■□□□□ 0.62
AP3B1O00203 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.91■□□□□ 0.62
AP3B1O00203 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.91■□□□□ 0.62
AP3B1O00203 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3B1O00203 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.91■□□□□ 0.62
AP3B1O00203 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
AP3B1O00203 ABHD17AP1-201ENST00000358206 933 ntBASIC18.9■□□□□ 0.62
AP3B1O00203 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 GCSHP5-201ENST00000443090 522 ntBASIC18.9■□□□□ 0.62
AP3B1O00203 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3B1O00203 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3B1O00203 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3B1O00203 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3B1O00203 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
AP3B1O00203 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3B1O00203 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AP3B1O00203 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3B1O00203 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms