Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AP000523.1-201ENST00000398242 1049 ntBASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 UPK3BP1-201ENST00000428678 509 ntBASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.05■□□□□ 0.32
NPIPA2E9PIF3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 MIR4674-201ENST00000582457 87 ntBASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NPIPA2E9PIF3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 AL671277.2-201ENST00000458060 996 ntBASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPIPA2E9PIF3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms