Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
USP27XA6NNY8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 LSM12P1-201ENST00000411836 588 ntBASIC20.2■□□□□ 0.82
USP27XA6NNY8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 AD000864.1-201ENST00000624076 2295 ntBASIC20.2■□□□□ 0.82
USP27XA6NNY8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP27XA6NNY8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 TSPY21P-201ENST00000433481 731 ntBASIC20.19■□□□□ 0.82
USP27XA6NNY8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 MIR6821-201ENST00000617625 74 ntBASIC20.19■□□□□ 0.82
USP27XA6NNY8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP27XA6NNY8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
USP27XA6NNY8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 AC068587.9-201ENST00000641814 219 ntBASIC20.18■□□□□ 0.82
USP27XA6NNY8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP27XA6NNY8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
USP27XA6NNY8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 AL512625.2-201ENST00000417533 625 ntBASIC20.17■□□□□ 0.82
USP27XA6NNY8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP27XA6NNY8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP27XA6NNY8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms