Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 MIR4758-201ENST00000577688 71 ntBASIC20.25■□□□□ 0.83
CCDC66A2RUB6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 SDHAP1-207ENST00000440850 2000 ntBASIC20.25■□□□□ 0.83
CCDC66A2RUB6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 GUSBP6-202ENST00000438529 1198 ntBASIC20.24■□□□□ 0.83
CCDC66A2RUB6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.24■□□□□ 0.83
CCDC66A2RUB6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 MYC-209ENST00000641252 345 ntBASIC20.24■□□□□ 0.83
CCDC66A2RUB6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC66A2RUB6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.23■□□□□ 0.83
CCDC66A2RUB6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TSPY6P-201ENST00000448518 926 ntBASIC20.23■□□□□ 0.83
CCDC66A2RUB6 AC097658.1-201ENST00000475555 843 ntBASIC20.23■□□□□ 0.83
CCDC66A2RUB6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.23■□□□□ 0.83
CCDC66A2RUB6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CCDC66A2RUB6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.22■□□□□ 0.83
CCDC66A2RUB6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 NCF1B-203ENST00000435988 1254 ntBASIC20.22■□□□□ 0.83
CCDC66A2RUB6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC66A2RUB6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms