Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC022616.7-201ENST00000525383 220 ntBASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 WWOX-216ENST00000569818 525 ntBASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 MIR3180-5-201ENST00000583743 153 ntBASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 NTF6B-201ENST00000591913 560 ntBASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC011558.1-201ENST00000623459 338 ntBASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 AL512353.2-201ENST00000448759 1962 ntBASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC116562.4-201ENST00000641316 2276 ntBASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
IGHV4-28A0A0C4DH34 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 TSPY5P-201ENST00000426936 936 ntBASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC063952.2-201ENST00000498792 1227 ntBASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 NEK4P2-201ENST00000580004 1012 ntBASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PKD1P1-201ENST00000458669 6805 ntBASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-28A0A0C4DH34 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC005332.7-201ENST00000614046 2005 ntBASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV4-28A0A0C4DH34 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms