Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CRYGFP-201ENST00000418459 633 ntBASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 AC066615.1-201ENST00000640911 628 ntBASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV2A0A0B4J234 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 C2orf69P3-201ENST00000565542 1120 ntBASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV2A0A0B4J234 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 CCR12P-201ENST00000446203 998 ntBASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 TSPY17P-201ENST00000450329 467 ntBASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms