Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 GNAS-203ENST00000306120 1878 ntBASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC141586.5-201ENST00000624546 2050 ntBASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 KRT8P41-201ENST00000533985 1514 ntBASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC008403.3-201ENST00000598924 454 ntBASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC104771.1-201ENST00000603335 964 ntBASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-7A0A0A0MS04 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC012313.1-201ENST00000593393 3059 ntBASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-7A0A0A0MS04 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-7A0A0A0MS04 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms