Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN7Q9Y6W3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 MFSD11-216ENST00000590393 1141 ntBASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 AL118508.1-201ENST00000613502 2345 ntBASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 AL162727.3-201ENST00000635661 2787 ntBASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN7Q9Y6W3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 AL162412.1-201ENST00000567129 965 ntBASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 AC016405.3-201ENST00000607710 860 ntBASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 AC105020.6-201ENST00000621523 1217 ntBASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 IRX1P1-201ENST00000438849 1838 ntBASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN7Q9Y6W3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 KRT19P1-201ENST00000405746 1186 ntBASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 TERF1P5-201ENST00000477545 1207 ntBASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 AC142381.2-201ENST00000566120 298 ntBASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CAPN7Q9Y6W3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms