Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 HCG11-201ENST00000411553 5696 ntBASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX49Q9Y6V7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 CYP2D8P-201ENST00000433633 1490 ntBASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 AL031598.1-201ENST00000561511 1773 ntBASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 RN7SL850P-201ENST00000579959 291 ntBASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX49Q9Y6V7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 MIR1238-201ENST00000408483 83 ntBASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX49Q9Y6V7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 NIFKP9-201ENST00000419265 221 ntBASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 AC018553.1-201ENST00000616682 1458 ntBASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 BICD1-207ENST00000551848 1962 ntBASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX49Q9Y6V7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
DDX49Q9Y6V7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms