Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 MIR4785-201ENST00000585005 73 ntBASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS9D1Q9Y2B5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS9D1Q9Y2B5 RCC2P3-201ENST00000418112 1537 ntBASIC18.64■□□□□ 0.58
VPS9D1Q9Y2B5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.64■□□□□ 0.58
VPS9D1Q9Y2B5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 AL109659.2-201ENST00000606809 1674 ntBASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 AP005242.2-201ENST00000580065 1175 ntBASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 Z99916.2-201ENST00000604037 246 ntBASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VPS9D1Q9Y2B5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 AC112777.1-201ENST00000540175 1423 ntBASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS9D1Q9Y2B5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 UNC93B2-201ENST00000285383 730 ntBASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 AP003071.4-201ENST00000562276 1284 ntBASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS9D1Q9Y2B5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms